Nucleotide Sequences
The mitochondrial genome of Herdmania momus is readily available and linked below. Late 2012, however, the complete nuclear DNA genome is to be sequenced. The red-throated ascidian will be one of only two Great Barrier Reef invertebrates to have this honour, second to the demosponge Amphimedon queenslandica.
Mitochondrial DNA
Herdmania momus unknown protein precursor (HmEGFL-1) mRNA, complete cds
Locus: HMU82540 1213 bp mRNA linear INV 26-JUN-2002
Authors: Arnold,J.M., Eri,R., Degnan,B.M. and Lavin,M.F.
Title: Novel gene containing multiple epidermal growth factor-like motifs transiently expressed in the papillae of the ascidian tadpole larvae
Journal: Dev. Dyn. 210 (3), 264-273 (1997)
Herdmania momus serine proteinase (Hmserp1) mRNA, complete cds
Locus: HMU63517 1373 bp mRNA linear INV 14-AUG-1997
Authors: Arnold,J.M., Kennett,C. and Lavin,M.F.
Title: Transient expression of a novel serine protease in the ectoderm of the ascidian Herdmania momus during development
Journal: Dev. Genes Evol. 206, 455-463 (1997)
Herdmania momus clone AHox3 homeobox protein mRNA, partial cds.
LOCUS HMU09940 63 bp mRNA linear INV 01-JUN-1994
AUTHORS Kennett,C.V.D.
TITLE Cloning and Sequencing of Homeoboxes from the Ascidian Herdmania momus
JOURNAL Unpublished
Herdmania momus clone AHox4 homeobox protein mRNA, partial cds.
LOCUS HMU09939 63 bp DNA linear INV 01-JUN-1994
AUTHORS Kennett,C.V.D.
TITLE Cloning and Sequencing of Homeoboxes from the Ascidian Herdmania
momus
JOURNAL Unpublished
Herdmania momus clone APou1 homeobox protein mRNA, partial cds.
LOCUS HMU09938 63 bp DNA linear INV 01-JUN-1994
AUTHORS Kennett,C.V.D.
TITLE Cloning and Sequencing of Homeoboxes from the Ascidian Herdmania
momus
JOURNAL Unpublished
Herdmania momus clone AHox2 homeobox protein mRNA, partial cds.
LOCUS HMU09802 63 bp mRNA linear INV 01-JUN-1994
AUTHORS Kennett,C.V.D.
TITLE Cloning and Sequencing of Homeoboxes from the Ascidian Herdmania momus
JOURNAL Unpublished
Herdmania momus mitochondrion, complete genome.
LOCUS NC_013561 15816 bp DNA circular INV 18-DEC-2009
AUTHORS Singh,T.R., Tsagkogeorga,G., Delsuc,F., Blanquart,S., Shenkar,N.,
Loya,Y., Douzery,E.J. and Huchon,D.
TITLE Tunicate mitogenomics and phylogenetics: peculiarities of the
Herdmania momus mitochondrial genome and support for the new
chordate phylogeny
JOURNAL BMC Genomics 10, 534 (2009)
PUBMED 19922605
Herdmania momus 18S ribosomal RNA gene, partial sequence.
LOCUS AF165827 1815 bp DNA linear INV 04-MAR-2009
AUTHORS Swalla,B.J., Cameron,C.B., Corley,L.S. and Garey,J.R.
TITLE Urochordates are monophyletic within the deuterostomes
JOURNAL Syst. Biol. 49 (1), 52-64 (2000)
PUBMED 12116483
H.momus (Ascidian) Asox3 mRNA.
LOCUS X79250 170 bp mRNA linear INV 18-APR-2005
AUTHORS Degnan,B.M.
TITLE Molecular analysis of invertebrate development and growth:
identification of developmentally-regulated genes in model and
commercially-important species
JOURNAL (in) Cooksey,K. (Ed.);
MOLECULAR APPROACHES TO THE STUDY OF THE OCEAN: 1-1;
Chapman and Hall, London (1997)
H.momus (Ascidian) Asox2 mRNA.
LOCUS X79249 170 bp mRNA linear INV 18-APR-2005
AUTHORS Degnan,B.M.
TITLE Molecular analysis of invertebrate development and growth:
identification of developmentally-regulated genes in model and
commercially-important species
JOURNAL (in) Cooksey,K. (Ed.);
MOLECULAR APPROACHES TO THE STUDY OF THE OCEAN: 1-1;
Chapman and Hall, London (1997)
H.momus (Ascidian) Asox1 mRNA.
LOCUS X79248 170 bp mRNA linear INV 18-APR-2005
AUTHORS Degnan,B.M.
TITLE Molecular analysis of invertebrate development and growth:
identification of developmentally-regulated genes in model and
commercially-important species
JOURNAL (in) Cooksey,K. (Ed.);
MOLECULAR APPROACHES TO THE STUDY OF THE OCEAN: 1-1;
Chapman and Hall, London (1997)
Herdmania momus rDNA for 18S, 5.8S and 26S ribosomal RNA.
LOCUS X53538 7967 bp DNA linear INV 28-APR-1991
AUTHORS Degnan,B.M., Yan,J., Hawkins,C.J. and Lavin,M.F.
TITLE rRNA genes from the lower chordate Herdmania momus: structural
similarity with higher eukaryotes
JOURNAL Nucleic Acids Res. 18 (23), 7063-7070 (1990)
PUBMED 2263465
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